#------------------------------------------------------------------------------ #$Date: 2020-04-17 23:04:10 +0300 (Fri, 17 Apr 2020) $ #$Revision: 250894 $ #$URL: file:///home/coder/svn-repositories/cod/cif/3/00/00/3000019.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_3000019 loop_ _publ_author_name 'Ana B. Caballero' 'Antonio Rodr\'iguez Di\'eguez' 'Miguel Quir\'os' 'Juan M. Salas' '\'Oscar Huertas' 'Inmaculada Ram\'irez Mac\'ias' 'Francisco Olmo' 'Clotilde Mar\'in' 'Guillermo Chaves-Lemaur' 'Ram\'on Guti\'errez S\'anchez' 'Manuel S\'anchez-Moreno' _publ_section_title ; Triazolopyrimidine Compounds Containing First-Row Transition Metals and their Activity against the Neglected Infectious Chagas Disease and Leishmaniasis ; _journal_name_full 'European Journal of Medicinal Chemistry' _journal_page_first 526 _journal_page_last 534 _journal_paper_doi 10.1016/j.ejmech.2014.08.26 _journal_volume 85 _journal_year 2014 _chemical_formula_moiety 'C14 H24 Fe N8 O4 2+, 2(C7 H8 N4), 2(Cl O4 1-), 2(H2 O)' _chemical_formula_sum 'C28 H44 Cl2 Fe N16 O14' _chemical_formula_weight 955.54 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 111.748(1) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 14.8776(11) _cell_length_b 8.5567(6) _cell_length_c 17.6690(13) _cell_measurement_reflns_used 4487 _cell_measurement_temperature 570(2) _cell_measurement_theta_max 26.44 _cell_measurement_theta_min 2.48 _cell_volume 2089.2(3) _computing_cell_refinement 'Bruker smart' _computing_data_collection 'Bruker smart' _computing_data_reduction 'Bruker smart' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXL-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 570(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Bruker Axs APEX automatic diffractometer' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0226 _diffrn_reflns_av_sigmaI/netI 0.0261 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 10797 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.53 _exptl_absorpt_coefficient_mu 0.571 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.741 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details 'Bruker SADABS (Bruker, 1999)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.519 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_F_000 992 _exptl_crystal_size_max 0.43 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.24 _refine_diff_density_max 0.375 _refine_diff_density_min -0.266 _refine_diff_density_rms 0.048 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.092 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 281 _refine_ls_number_reflns 3663 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.092 _refine_ls_R_factor_all 0.0417 _refine_ls_R_factor_gt 0.0370 _refine_ls_shift/su_max 0.069 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0620P)^2^+0.5365P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1054 _refine_ls_wR_factor_ref 0.1090 _reflns_number_gt 3213 _reflns_number_total 3663 _reflns_threshold_expression >2sigma(I) _cod_data_source_file Compound2.cif _cod_data_source_block an486 _cod_depositor_comments ; Changed the '_[local]_cod_data_source_file' and '_[local]_cod_data_source_block' data names to '_cod_data_source_file' and '_cod_data_source_block'. Antanas Vaitkus, 2020-04-18 The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'Empirical' changed to 'empirical' according to the built-in table from CIF Core dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1891 2012-01-12 08:04:46Z andrius Releasing structure 3000019 into public domain as published material. ; _cod_database_code 3000019 _cod_database_fobs_code 3000019 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Fe1 Fe 0.5000 0.5000 0.0000 0.03298(15) Uani 1 2 d S N1A N 0.57323(13) 0.6651(2) 0.24921(11) 0.0416(4) Uani 1 1 d . C2A C 0.58244(16) 0.6426(3) 0.17884(13) 0.0404(5) Uani 1 1 d . H2A H 0.6323 0.6886 0.1669 0.048 Uiso 1 1 calc R N3A N 0.51610(12) 0.5498(2) 0.12474(10) 0.0355(4) Uani 1 1 d . C3AA C 0.45850(15) 0.5091(2) 0.16474(12) 0.0317(5) Uani 1 1 d . N4A N 0.38043(13) 0.4176(2) 0.13868(10) 0.0374(4) Uani 1 1 d . C5A C 0.33721(16) 0.3941(3) 0.19118(14) 0.0413(5) Uani 1 1 d . C6A C 0.37145(17) 0.4601(3) 0.27003(13) 0.0410(5) Uani 1 1 d . H6A H 0.3397 0.4379 0.3053 0.049 Uiso 1 1 calc R C71 C 0.44969(16) 0.5552(3) 0.29518(12) 0.0380(5) Uani 1 1 d . N8A N 0.49267(12) 0.5775(2) 0.23966(10) 0.0328(4) Uani 1 1 d . C51A C 0.2476(2) 0.2964(4) 0.16289(18) 0.0652(8) Uani 1 1 d . H51A H 0.1923 0.3618 0.1363 0.098 Uiso 1 1 d R H51B H 0.2404 0.2457 0.2088 0.098 Uiso 1 1 d R H51C H 0.2524 0.2190 0.1252 0.098 Uiso 1 1 d R C71A C 0.49039(19) 0.6386(3) 0.37417(14) 0.0538(6) Uani 1 1 d . H71A H 0.4542 0.6114 0.4073 0.081 Uiso 1 1 d R H71B H 0.4863 0.7493 0.3646 0.081 Uiso 1 1 d R H71C H 0.5569 0.6093 0.4017 0.081 Uiso 1 1 d R N1B N 0.47261(16) 0.0473(3) 0.25746(13) 0.0522(5) Uani 1 1 d . C2B C 0.47803(19) 0.0475(3) 0.18500(16) 0.0530(6) Uani 1 1 d . H2B H 0.4355 -0.0110 0.1424 0.064 Uiso 1 1 calc R N3B N 0.54801(15) 0.1361(2) 0.17472(12) 0.0468(5) Uani 1 1 d . C3AB C 0.59162(16) 0.1993(3) 0.24798(13) 0.0380(5) Uani 1 1 d . N4B N 0.66704(14) 0.2974(2) 0.27345(12) 0.0426(5) Uani 1 1 d . C5B C 0.69467(16) 0.3452(3) 0.35032(15) 0.0439(5) Uani 1 1 d . C6B C 0.64876(17) 0.2950(3) 0.40295(14) 0.0460(6) Uani 1 1 d . H6B H 0.6708 0.3319 0.4562 0.055 Uiso 1 1 calc R C7B C 0.57320(17) 0.1941(3) 0.37752(14) 0.0428(5) Uani 1 1 d . N8B N 0.54640(13) 0.1471(2) 0.29873(11) 0.0390(4) Uani 1 1 d . C51B C 0.7785(2) 0.4555(4) 0.38122(19) 0.0644(7) Uani 1 1 d . H51D H 0.7987 0.4833 0.3373 0.097 Uiso 1 1 d R H51E H 0.8313 0.4069 0.4240 0.097 Uiso 1 1 d R H51F H 0.7589 0.5478 0.4019 0.097 Uiso 1 1 d R C71B C 0.5184(2) 0.1322(4) 0.42629(18) 0.0649(8) Uani 1 1 d . H71D H 0.5339 0.1921 0.4754 0.097 Uiso 1 1 d R H71E H 0.5359 0.0249 0.4398 0.097 Uiso 1 1 d R H71F H 0.4502 0.1391 0.3952 0.097 Uiso 1 1 d R Cl1C Cl 0.23907(4) 0.77842(7) 0.06419(3) 0.04652(18) Uani 1 1 d . O2C O 0.32790(17) 0.7989(3) 0.05439(17) 0.1000(9) Uani 1 1 d . O3C O 0.18724(18) 0.6611(3) 0.0100(2) 0.1121(10) Uani 1 1 d . O4C O 0.18558(17) 0.9195(3) 0.04978(13) 0.0833(7) Uani 1 1 d . O5C O 0.2588(3) 0.7335(4) 0.14442(16) 0.1257(12) Uani 1 1 d . O1W O 0.54094(12) 0.26220(19) 0.02629(10) 0.0486(4) Uani 1 1 d . H11W H 0.5448 0.2262 0.0685 0.058 Uiso 1 1 d R H12W H 0.5826 0.2371 0.0167 0.058 Uiso 1 1 d R O2W O 0.64884(11) 0.5636(2) 0.03180(9) 0.0453(4) Uani 1 1 d . H21W H 0.6859 0.5022 0.0646 0.054 Uiso 1 1 d R H22W H 0.6659 0.5749 -0.0024 0.054 Uiso 1 1 d R O3W O 0.76796(13) 0.4054(2) 0.16540(11) 0.0604(5) Uani 1 1 d . H31W H 0.7452 0.3673 0.1978 0.072 Uiso 1 1 d R H32W H 0.8028 0.3513 0.1648 0.072 Uiso 1 1 d R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Fe1 0.0317(2) 0.0417(3) 0.0277(2) 0.00045(16) 0.01348(18) -0.00219(17) N1A 0.0361(10) 0.0464(11) 0.0424(11) -0.0081(8) 0.0149(8) -0.0065(8) C2A 0.0382(12) 0.0460(13) 0.0395(12) -0.0012(10) 0.0174(10) -0.0056(10) N3A 0.0346(9) 0.0436(10) 0.0309(9) -0.0004(8) 0.0151(8) -0.0037(8) C3AA 0.0314(11) 0.0357(11) 0.0284(10) 0.0004(8) 0.0115(9) 0.0016(8) N4A 0.0371(10) 0.0453(11) 0.0314(9) -0.0004(8) 0.0146(8) -0.0051(8) C5A 0.0396(12) 0.0464(13) 0.0408(12) 0.0038(10) 0.0183(10) -0.0036(10) C6A 0.0437(13) 0.0503(13) 0.0348(12) 0.0056(10) 0.0213(10) 0.0019(10) C71 0.0390(12) 0.0465(12) 0.0303(11) 0.0033(9) 0.0150(9) 0.0102(10) N8A 0.0334(9) 0.0364(10) 0.0293(9) -0.0018(7) 0.0122(7) 0.0001(8) C51A 0.0561(16) 0.086(2) 0.0593(17) -0.0081(15) 0.0286(14) -0.0303(15) C71A 0.0556(15) 0.0706(18) 0.0362(12) -0.0139(12) 0.0181(11) 0.0024(13) N1B 0.0527(13) 0.0492(12) 0.0579(13) -0.0049(10) 0.0241(11) -0.0096(10) C2B 0.0551(15) 0.0511(15) 0.0503(15) -0.0050(12) 0.0165(12) -0.0019(12) N3B 0.0540(12) 0.0477(12) 0.0405(11) 0.0001(9) 0.0196(9) 0.0044(10) C3AB 0.0414(12) 0.0353(12) 0.0410(12) 0.0035(9) 0.0197(10) 0.0065(9) N4B 0.0445(11) 0.0405(11) 0.0481(11) 0.0050(8) 0.0233(9) 0.0046(9) C5B 0.0400(12) 0.0398(13) 0.0519(14) 0.0003(10) 0.0168(11) 0.0045(10) C6B 0.0494(14) 0.0511(14) 0.0378(12) -0.0037(10) 0.0164(11) 0.0068(11) C7B 0.0487(14) 0.0431(13) 0.0421(13) 0.0031(10) 0.0233(11) 0.0084(10) N8B 0.0397(10) 0.0385(10) 0.0429(10) 0.0016(8) 0.0201(8) 0.0015(8) C51B 0.0551(16) 0.0597(17) 0.078(2) -0.0133(14) 0.0245(15) -0.0126(13) C71B 0.0739(19) 0.079(2) 0.0558(16) 0.0011(14) 0.0411(15) -0.0086(16) Cl1C 0.0450(3) 0.0563(4) 0.0410(3) 0.0009(2) 0.0192(3) 0.0066(3) O2C 0.0762(15) 0.127(2) 0.123(2) -0.0427(17) 0.0679(15) -0.0273(14) O3C 0.0752(16) 0.101(2) 0.146(3) -0.0539(18) 0.0253(16) -0.0185(14) O4C 0.1004(17) 0.0733(15) 0.0715(14) 0.0120(11) 0.0265(12) 0.0375(13) O5C 0.197(3) 0.134(2) 0.0684(16) 0.0456(15) 0.0745(19) 0.094(2) O1W 0.0582(10) 0.0512(10) 0.0442(9) 0.0074(7) 0.0281(8) 0.0093(8) O2W 0.0370(8) 0.0667(11) 0.0342(8) -0.0002(7) 0.0158(7) -0.0052(8) O3W 0.0544(11) 0.0736(13) 0.0568(11) 0.0160(9) 0.0249(9) 0.0146(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Fe Fe 0.3463 0.8444 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1W Fe1 O1W 180.0 . 3_665 O1W Fe1 O2W 90.08(7) . . O1W Fe1 O2W 89.92(7) 3_665 . O1W Fe1 O2W 89.92(7) . 3_665 O1W Fe1 O2W 90.08(7) 3_665 3_665 O2W Fe1 O2W 180.0 . 3_665 O1W Fe1 N3A 87.06(6) . 3_665 O1W Fe1 N3A 92.94(6) 3_665 3_665 O2W Fe1 N3A 91.76(6) . 3_665 O2W Fe1 N3A 88.24(6) 3_665 3_665 O1W Fe1 N3A 92.94(6) . . O1W Fe1 N3A 87.06(6) 3_665 . O2W Fe1 N3A 88.24(6) . . O2W Fe1 N3A 91.76(6) 3_665 . N3A Fe1 N3A 180.00(9) 3_665 . C2A N1A N8A 101.34(17) . . N1A C2A N3A 116.81(19) . . C3AA N3A C2A 102.82(17) . . C3AA N3A Fe1 129.18(14) . . C2A N3A Fe1 127.75(14) . . N4A C3AA N3A 127.93(19) . . N4A C3AA N8A 123.48(18) . . N3A C3AA N8A 108.59(17) . . C5A N4A C3AA 115.72(18) . . N4A C5A C6A 122.6(2) . . N4A C5A C51A 117.1(2) . . C6A C5A C51A 120.3(2) . . C71 C6A C5A 121.1(2) . . C6A C71 N8A 114.96(19) . . C6A C71 C71A 126.9(2) . . N8A C71 C71A 118.1(2) . . C3AA N8A C71 122.12(18) . . C3AA N8A N1A 110.44(16) . . C71 N8A N1A 127.43(17) . . C2B N1B N8B 101.08(19) . . N1B C2B N3B 117.4(2) . . C3AB N3B C2B 102.67(19) . . N3B C3AB N4B 128.9(2) . . N3B C3AB N8B 108.78(19) . . N4B C3AB N8B 122.3(2) . . C5B N4B C3AB 116.08(19) . . N4B C5B C6B 122.6(2) . . N4B C5B C51B 117.8(2) . . C6B C5B C51B 119.6(2) . . C7B C6B C5B 121.4(2) . . C6B C7B N8B 114.9(2) . . C6B C7B C71B 126.9(2) . . N8B C7B C71B 118.2(2) . . C7B N8B N1B 127.12(19) . . C7B N8B C3AB 122.77(19) . . N1B N8B C3AB 110.10(18) . . O5C Cl1C O3C 110.6(2) . . O5C Cl1C O2C 107.9(2) . . O3C Cl1C O2C 107.99(16) . . O5C Cl1C O4C 108.14(14) . . O3C Cl1C O4C 110.91(16) . . O2C Cl1C O4C 111.28(17) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Fe1 O1W 2.1254(16) . Fe1 O1W 2.1254(16) 3_665 Fe1 O2W 2.1433(14) . Fe1 O2W 2.1433(14) 3_665 Fe1 N3A 2.1692(17) 3_665 Fe1 N3A 2.1692(17) . N1A C2A 1.314(3) . N1A N8A 1.370(2) . C2A N3A 1.349(3) . N3A C3AA 1.343(3) . C3AA N4A 1.333(3) . C3AA N8A 1.362(3) . N4A C5A 1.325(3) . C5A C6A 1.412(3) . C5A C51A 1.494(3) . C6A C71 1.353(3) . C71 N8A 1.368(3) . C71 C71A 1.482(3) . N1B C2B 1.312(3) . N1B N8B 1.368(3) . C2B N3B 1.354(3) . N3B C3AB 1.329(3) . C3AB N4B 1.339(3) . C3AB N8B 1.380(3) . N4B C5B 1.329(3) . C5B C6B 1.409(3) . C5B C51B 1.496(3) . C6B C7B 1.355(3) . C7B N8B 1.359(3) . C7B C71B 1.486(3) . Cl1C O5C 1.391(2) . Cl1C O3C 1.404(2) . Cl1C O2C 1.406(2) . Cl1C O4C 1.416(2) .