#------------------------------------------------------------------------------ #$Date: 2019-06-18 05:52:54 +0300 (Tue, 18 Jun 2019) $ #$Revision: 216044 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/15/69/7156917.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7156917 loop_ _publ_author_name 'Sun, Wenxi' 'Peng, Cheng' 'Yao, Zhigang' 'Xu, Fan' _publ_section_title ; Diastereoselective synthesis of -dicarbonyl cyclopropanes via a lanthanide amide-catalysed reaction ; _journal_name_full 'Organic & Biomolecular Chemistry' _journal_paper_doi 10.1039/C9OB00732F _journal_year 2019 _chemical_formula_moiety 'C25 H22 O3' _chemical_formula_sum 'C25 H22 O3' _chemical_formula_weight 370.43 _space_group_crystal_system monoclinic _space_group_IT_number 14 _space_group_name_Hall '-P 2ybc' _space_group_name_H-M_alt 'P 1 21/c 1' _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_date 2018-07-24 _audit_creation_method ; Olex2 1.2 (compiled 2018.05.29 svn.r3508 for OlexSys, GUI svn.r5506) ; _audit_update_record ; 2018-09-11 deposited with the CCDC. 2019-06-17 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 109.83(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 16.207(11) _cell_length_b 7.147(5) _cell_length_c 18.155(12) _cell_measurement_reflns_used 9904 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.01 _cell_measurement_theta_min 2.30 _cell_volume 1978(2) _computing_cell_refinement 'SAINT v8.37A (Bruker, 2015)' _computing_data_reduction 'SAINT v8.37A (Bruker, 2015)' _computing_molecular_graphics 'Olex2 (Dolomanov et al., 2009)' _computing_publication_material 'Olex2 (Dolomanov et al., 2009)' _computing_structure_refinement 'XL (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293.15 _diffrn_measured_fraction_theta_full 0.994 _diffrn_measured_fraction_theta_max 0.994 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1238 _diffrn_reflns_av_unetI/netI 0.0728 _diffrn_reflns_limit_h_max 21 _diffrn_reflns_limit_h_min -21 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -23 _diffrn_reflns_number 38641 _diffrn_reflns_theta_full 27.56 _diffrn_reflns_theta_max 27.56 _diffrn_reflns_theta_min 2.39 _diffrn_source 'fine-focus sealed tube' _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.081 _exptl_absorpt_correction_T_max 0.7456 _exptl_absorpt_correction_T_min 0.3131 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; SADABS-2016/2 (Bruker,2016/2) was used for absorption correction. wR2(int) was 0.1743 before and 0.1181 after correction. The Ratio of minimum to maximum transmission is 0.4199. The \l/2 correction factor is Not present. ; _exptl_crystal_colour colourless _exptl_crystal_colour_primary colourless _exptl_crystal_density_diffrn 1.244 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 784 _exptl_crystal_size_max 0.2 _exptl_crystal_size_mid 0.1 _exptl_crystal_size_min 0.1 _refine_diff_density_max 0.317 _refine_diff_density_min -0.379 _refine_diff_density_rms 0.104 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.119 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 254 _refine_ls_number_reflns 4538 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.119 _refine_ls_R_factor_all 0.0812 _refine_ls_R_factor_gt 0.0615 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0787P)^2^+0.5610P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1583 _refine_ls_wR_factor_ref 0.1760 _reflns_number_gt 3542 _reflns_number_total 4538 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c9ob00732f2.cif _cod_data_source_block mo_b180412a_0m_a_a _cod_database_code 7156917 _olex2_refinement_description ; 1. Fixed Uiso At 1.2 times of: All C(H) groups, All C(H,H) groups At 1.5 times of: All C(H,H,H) groups 2.a Ternary CH refined with riding coordinates: C6(H6), C15(H15) 2.b Secondary CH2 refined with riding coordinates: C13(H13A,H13B) 2.c Aromatic/amide H refined with riding coordinates: C1(H1), C2(H2), C3(H3), C9(H9), C10(H10), C11(H11), C16(H16), C17(H17), C19(H19), C20(H20), C21(H21), C22(H22), C23(H23), C24(H24), C25(H25) 2.d Idealised Me refined as rotating group: C12(H12A,H12B,H12C) ; _olex2_submission_special_instructions 'No special instructions were received' loop_ _space_group_symop_id _space_group_symop_operation_xyz 1 'x, y, z' 2 '-x, y+1/2, -z+1/2' 3 '-x, -y, -z' 4 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags_posn O1 O 0.79479(9) 0.56009(18) 0.85924(7) 0.0342(3) Uani 1 d . O2 O 0.78428(11) 0.3618(2) 0.76143(9) 0.0464(4) Uani 1 d . O3 O 0.79966(9) 0.97984(19) 0.88603(8) 0.0363(3) Uani 1 d . C1 C 0.64375(18) 0.5109(4) 0.48918(14) 0.0551(6) Uani 1 d . H1 H 0.6273 0.4742 0.4370 0.066 Uiso 1 calc R C2 C 0.60714(19) 0.4259(4) 0.53893(15) 0.0609(7) Uani 1 d . H2 H 0.5655 0.3321 0.5201 0.073 Uiso 1 calc R C3 C 0.63155(15) 0.4784(3) 0.61568(13) 0.0446(5) Uani 1 d . H3 H 0.6061 0.4202 0.6485 0.054 Uiso 1 calc R C4 C 0.69386(11) 0.6177(2) 0.64553(10) 0.0275(4) Uani 1 d . C5 C 0.72171(11) 0.6663(2) 0.73044(10) 0.0246(4) Uani 1 d . C6 C 0.74565(11) 0.8679(2) 0.75592(10) 0.0255(4) Uani 1 d . H6 H 0.7389 0.9549 0.7125 0.031 Uiso 1 calc R C7 C 0.81776(12) 0.9201(2) 0.83085(10) 0.0264(4) Uani 1 d . C8 C 0.91033(12) 0.9047(2) 0.83397(10) 0.0271(4) Uani 1 d . C9 C 0.97548(13) 0.9853(3) 0.89687(11) 0.0348(4) Uani 1 d . H9 H 0.9600 1.0499 0.9347 0.042 Uiso 1 calc R C10 C 1.06298(13) 0.9709(3) 0.90389(12) 0.0412(5) Uani 1 d . H10 H 1.1060 1.0247 0.9464 0.049 Uiso 1 calc R C11 C 1.08628(13) 0.8766(3) 0.84779(13) 0.0419(5) Uani 1 d . H11 H 1.1450 0.8668 0.8524 0.050 Uiso 1 calc R C12 C 0.8802(2) 0.5143(4) 0.99258(14) 0.0686(8) Uani 1 d . H12A H 0.9090 0.6308 0.9909 0.103 Uiso 1 calc GR H12B H 0.9203 0.4317 1.0293 0.103 Uiso 1 calc GR H12C H 0.8303 0.5365 1.0085 0.103 Uiso 1 calc GR C13 C 0.85118(15) 0.4285(3) 0.91468(13) 0.0460(6) Uani 1 d . H13A H 0.9015 0.3980 0.8996 0.055 Uiso 1 calc R H13B H 0.8193 0.3139 0.9152 0.055 Uiso 1 calc R C14 C 0.76942(11) 0.5119(2) 0.78372(11) 0.0279(4) Uani 1 d . C15 C 0.66150(11) 0.7938(2) 0.75971(10) 0.0253(4) Uani 1 d . H15 H 0.6631 0.7648 0.8129 0.030 Uiso 1 calc R C16 C 1.02235(14) 0.7967(3) 0.78464(13) 0.0426(5) Uani 1 d . H16 H 1.0381 0.7335 0.7467 0.051 Uiso 1 calc R C17 C 0.93487(13) 0.8106(3) 0.77778(12) 0.0365(5) Uani 1 d . H17 H 0.8922 0.7563 0.7352 0.044 Uiso 1 calc R C18 C 0.57320(11) 0.8493(2) 0.70587(10) 0.0266(4) Uani 1 d . C19 C 0.55891(13) 0.9658(3) 0.64153(11) 0.0344(4) Uani 1 d . H19 H 0.6064 1.0151 0.6304 0.041 Uiso 1 calc R C20 C 0.47409(14) 1.0092(3) 0.59374(12) 0.0424(5) Uani 1 d . H20 H 0.4654 1.0872 0.5507 0.051 Uiso 1 calc R C21 C 0.40321(14) 0.9385(3) 0.60925(12) 0.0421(5) Uani 1 d . H21 H 0.3466 0.9685 0.5770 0.050 Uiso 1 calc R C22 C 0.41606(13) 0.8228(3) 0.67272(13) 0.0403(5) Uani 1 d . H22 H 0.3681 0.7740 0.6834 0.048 Uiso 1 calc R C23 C 0.50015(12) 0.7791(3) 0.72063(12) 0.0330(4) Uani 1 d . H23 H 0.5082 0.7013 0.7636 0.040 Uiso 1 calc R C24 C 0.70438(15) 0.6494(3) 0.51710(12) 0.0423(5) Uani 1 d . H24 H 0.7290 0.7079 0.4838 0.051 Uiso 1 calc R C25 C 0.72923(12) 0.7030(3) 0.59472(11) 0.0327(4) Uani 1 d . H25 H 0.7704 0.7979 0.6130 0.039 Uiso 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0398(8) 0.0291(7) 0.0279(7) 0.0023(5) 0.0038(6) 0.0072(5) O2 0.0654(10) 0.0327(8) 0.0432(9) 0.0000(6) 0.0211(8) 0.0152(7) O3 0.0437(8) 0.0418(8) 0.0281(7) -0.0109(6) 0.0182(6) -0.0053(6) C1 0.0739(17) 0.0569(14) 0.0284(11) -0.0149(10) 0.0093(11) -0.0058(12) C2 0.0709(17) 0.0587(15) 0.0473(15) -0.0214(12) 0.0124(13) -0.0291(13) C3 0.0496(13) 0.0455(12) 0.0409(12) -0.0092(9) 0.0181(10) -0.0160(10) C4 0.0270(9) 0.0280(9) 0.0272(9) -0.0034(7) 0.0091(7) 0.0019(7) C5 0.0249(8) 0.0265(8) 0.0237(9) -0.0015(7) 0.0099(7) -0.0010(6) C6 0.0303(9) 0.0244(8) 0.0235(9) -0.0006(6) 0.0113(7) -0.0004(7) C7 0.0344(9) 0.0247(8) 0.0219(9) -0.0016(6) 0.0121(7) -0.0041(7) C8 0.0316(9) 0.0280(8) 0.0220(9) -0.0010(7) 0.0096(7) -0.0027(7) C9 0.0371(10) 0.0426(11) 0.0233(9) -0.0055(8) 0.0081(8) -0.0030(8) C10 0.0343(10) 0.0513(12) 0.0331(11) -0.0049(9) 0.0049(8) -0.0077(9) C11 0.0303(10) 0.0495(12) 0.0477(13) -0.0003(10) 0.0155(9) -0.0033(9) C12 0.082(2) 0.0692(17) 0.0365(14) 0.0065(12) -0.0028(13) 0.0256(15) C13 0.0524(13) 0.0385(11) 0.0385(12) 0.0092(9) 0.0041(10) 0.0160(10) C14 0.0275(9) 0.0281(9) 0.0313(10) 0.0004(7) 0.0143(7) -0.0002(7) C15 0.0283(9) 0.0274(8) 0.0229(9) 0.0019(7) 0.0123(7) 0.0019(7) C16 0.0402(11) 0.0507(12) 0.0432(12) -0.0113(10) 0.0223(10) -0.0027(9) C17 0.0350(10) 0.0441(11) 0.0312(10) -0.0120(8) 0.0122(8) -0.0068(8) C18 0.0301(9) 0.0270(8) 0.0242(9) -0.0012(7) 0.0113(7) 0.0044(7) C19 0.0349(10) 0.0420(10) 0.0299(10) 0.0071(8) 0.0157(8) 0.0084(8) C20 0.0457(12) 0.0528(12) 0.0272(10) 0.0070(9) 0.0104(9) 0.0155(10) C21 0.0334(10) 0.0503(12) 0.0350(11) -0.0055(9) 0.0018(8) 0.0102(9) C22 0.0290(10) 0.0437(11) 0.0487(13) -0.0050(9) 0.0140(9) -0.0010(8) C23 0.0312(9) 0.0334(9) 0.0366(10) 0.0024(8) 0.0143(8) 0.0021(7) C24 0.0513(12) 0.0497(12) 0.0268(10) -0.0001(9) 0.0143(9) 0.0055(10) C25 0.0329(10) 0.0382(10) 0.0267(10) -0.0014(8) 0.0098(8) -0.0010(8) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C14 O1 C13 116.51(15) C2 C1 H1 120.3 C24 C1 H1 120.3 C24 C1 C2 119.5(2) C1 C2 H2 119.8 C3 C2 C1 120.5(2) C3 C2 H2 119.8 C2 C3 H3 119.5 C2 C3 C4 121.0(2) C4 C3 H3 119.5 C3 C4 C5 119.61(17) C25 C4 C3 117.81(18) C25 C4 C5 122.57(16) C4 C5 C6 119.35(15) C4 C5 C14 113.87(15) C4 C5 C15 118.96(15) C6 C5 C15 57.73(11) C14 C5 C6 118.59(15) C14 C5 C15 117.24(15) C5 C6 H6 114.1 C7 C6 C5 123.21(14) C7 C6 H6 114.1 C15 C6 C5 62.20(11) C15 C6 H6 114.1 C15 C6 C7 119.27(15) O3 C7 C6 120.08(17) O3 C7 C8 121.23(16) C8 C7 C6 118.64(15) C9 C8 C7 118.44(17) C17 C8 C7 123.03(16) C17 C8 C9 118.52(18) C8 C9 H9 119.5 C10 C9 C8 120.92(19) C10 C9 H9 119.5 C9 C10 H10 120.1 C11 C10 C9 119.87(19) C11 C10 H10 120.1 C10 C11 H11 120.0 C10 C11 C16 120.0(2) C16 C11 H11 120.0 H12A C12 H12B 109.5 H12A C12 H12C 109.5 H12B C12 H12C 109.5 C13 C12 H12A 109.5 C13 C12 H12B 109.5 C13 C12 H12C 109.5 O1 C13 C12 108.58(18) O1 C13 H13A 110.0 O1 C13 H13B 110.0 C12 C13 H13A 110.0 C12 C13 H13B 110.0 H13A C13 H13B 108.4 O1 C14 C5 112.59(15) O2 C14 O1 123.36(17) O2 C14 C5 124.04(18) C5 C15 H15 113.7 C6 C15 C5 60.06(11) C6 C15 H15 113.7 C6 C15 C18 124.63(16) C18 C15 C5 120.49(15) C18 C15 H15 113.7 C11 C16 H16 119.9 C11 C16 C17 120.1(2) C17 C16 H16 119.9 C8 C17 H17 119.7 C16 C17 C8 120.57(18) C16 C17 H17 119.7 C19 C18 C15 124.17(17) C19 C18 C23 117.89(17) C23 C18 C15 117.95(17) C18 C19 H19 119.8 C18 C19 C20 120.45(19) C20 C19 H19 119.8 C19 C20 H20 119.6 C21 C20 C19 120.7(2) C21 C20 H20 119.6 C20 C21 H21 120.2 C20 C21 C22 119.68(19) C22 C21 H21 120.2 C21 C22 H22 120.0 C21 C22 C23 120.0(2) C23 C22 H22 120.0 C18 C23 H23 119.4 C22 C23 C18 121.25(19) C22 C23 H23 119.4 C1 C24 H24 119.9 C1 C24 C25 120.2(2) C25 C24 H24 119.9 C4 C25 H25 119.5 C24 C25 C4 120.99(19) C24 C25 H25 119.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C13 1.452(2) O1 C14 1.336(2) O2 C14 1.199(2) O3 C7 1.213(2) C1 H1 0.9300 C1 C2 1.379(4) C1 C24 1.366(3) C2 H2 0.9300 C2 C3 1.366(3) C3 H3 0.9300 C3 C4 1.390(3) C4 C5 1.493(3) C4 C25 1.382(3) C5 C6 1.523(2) C5 C14 1.498(3) C5 C15 1.555(2) C6 H6 0.9800 C6 C7 1.509(2) C6 C15 1.486(2) C7 C8 1.486(3) C8 C9 1.390(3) C8 C17 1.388(3) C9 H9 0.9300 C9 C10 1.384(3) C10 H10 0.9300 C10 C11 1.376(3) C11 H11 0.9300 C11 C16 1.381(3) C12 H12A 0.9600 C12 H12B 0.9600 C12 H12C 0.9600 C12 C13 1.465(3) C13 H13A 0.9700 C13 H13B 0.9700 C15 H15 0.9800 C15 C18 1.487(3) C16 H16 0.9300 C16 C17 1.384(3) C17 H17 0.9300 C18 C19 1.389(3) C18 C23 1.393(3) C19 H19 0.9300 C19 C20 1.389(3) C20 H20 0.9300 C20 C21 1.369(3) C21 H21 0.9300 C21 C22 1.375(3) C22 H22 0.9300 C22 C23 1.381(3) C23 H23 0.9300 C24 H24 0.9300 C24 C25 1.382(3) C25 H25 0.9300 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O3 C7 C8 C9 -9.3(3) O3 C7 C8 C17 169.45(18) C1 C2 C3 C4 -0.3(4) C1 C24 C25 C4 0.3(3) C2 C1 C24 C25 0.4(4) C2 C3 C4 C5 -177.5(2) C2 C3 C4 C25 1.0(3) C3 C4 C5 C6 -146.27(18) C3 C4 C5 C14 65.6(2) C3 C4 C5 C15 -79.1(2) C3 C4 C25 C24 -1.0(3) C4 C5 C6 C7 -144.04(17) C4 C5 C6 C15 107.57(17) C4 C5 C14 O1 178.99(14) C4 C5 C14 O2 -0.2(3) C4 C5 C15 C6 -108.25(17) C4 C5 C15 C18 6.7(2) C5 C4 C25 C24 177.43(17) C5 C6 C7 O3 -106.1(2) C5 C6 C7 C8 76.5(2) C5 C6 C15 C18 -108.29(19) C5 C15 C18 C19 -67.3(2) C5 C15 C18 C23 112.37(19) C6 C5 C14 O1 30.6(2) C6 C5 C14 O2 -148.62(18) C6 C5 C15 C18 114.95(18) C6 C7 C8 C9 168.02(16) C6 C7 C8 C17 -13.2(3) C6 C15 C18 C19 5.5(3) C6 C15 C18 C23 -174.93(16) C7 C6 C15 C5 -114.47(17) C7 C6 C15 C18 137.24(17) C7 C8 C9 C10 178.22(18) C7 C8 C17 C16 -178.41(19) C8 C9 C10 C11 0.4(3) C9 C8 C17 C16 0.3(3) C9 C10 C11 C16 0.0(3) C10 C11 C16 C17 -0.2(3) C11 C16 C17 C8 0.1(3) C13 O1 C14 O2 6.9(3) C13 O1 C14 C5 -172.35(16) C14 O1 C13 C12 173.5(2) C14 C5 C6 C7 2.6(2) C14 C5 C6 C15 -105.81(17) C14 C5 C15 C6 108.15(17) C14 C5 C15 C18 -136.90(17) C15 C5 C6 C7 108.39(19) C15 C5 C14 O1 -35.6(2) C15 C5 C14 O2 145.16(18) C15 C6 C7 O3 -31.9(2) C15 C6 C7 C8 150.73(16) C15 C18 C19 C20 179.38(18) C15 C18 C23 C22 -179.31(17) C17 C8 C9 C10 -0.6(3) C18 C19 C20 C21 0.2(3) C19 C18 C23 C22 0.3(3) C19 C20 C21 C22 -0.2(3) C20 C21 C22 C23 0.3(3) C21 C22 C23 C18 -0.3(3) C23 C18 C19 C20 -0.2(3) C24 C1 C2 C3 -0.4(4) C25 C4 C5 C6 35.4(2) C25 C4 C5 C14 -112.75(19) C25 C4 C5 C15 102.5(2)